Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814304.1_cds_XP_016497869.1_11957
CDS Infomation

[gene=LOC107816649] [db_xref=GeneID:107816649] [protein=protein terminal ear1 homolog] [protein_id=XP_016497869.1] [location=complement(join(13452..13853,14140..14281,14362..14487,14960..15560,15697..16426))] [gbkey=CDS]
Sequence

ATGGAGGACAATGGTATGGTTCATGGGAATCTTGATCCTAGAGCCCAAGAATTCATACCA
AGATATCCTTTTCACCAACCCCCTAACAATTCTTTACCTTTGCTCCCTAATCAATTTTAT
TATCCTGCTTATCCATGTCCACCTCAGTTGCCGCCGCCGTTGCCGCCGTCGTTACCGCCA
TACGGTGATGATGTTGGATACCATCAAGTTACACACACGGCGTACGTTAGCTCAAACCCA
CCTATGCCTACGCCTTTTTTGCCACCTCCAAGTTCAATGGCTACAAGAACTTTGTTGTTA
AGTATGGTTCCAGTTGAAGTGAGTGAGTCTATAGTGAGAAGGGATTTGGAAGTTTTTGGA
GATGTTCGAGCAGTGCAAATGGGAAGGTTAAGAGAAGGGATTGTAACGGTTCATTTTTAT
GATTTGAGGCACGCGCGAGCAGCGTTGATAGAGATTCAAGAACAGAACATGCAACAGCAG
TGTCGTTTAAGGAGGCATTATGAGGAGTCTATTTATTCTACTACTATGGGTGGTTTAATT
CTTCCCCCTCTTCCATTTCCACTTCCTCCCCCGGCGCGTGGGCTTATTGCTGGAAGAGCT
GTTTGGGCTCAGTTTACTTTCCCTCTGACTTCTAGTCTTCCTGATGGGAATAACCAAGGG
ACACTTGTGATTTTCAATTTGGACTCTCATACTTCTTCTACTTATCTTAGAGATATTTTT
CAAGCTTTTGGGAATGTGAAGGAATTGAGAGAGACACCAATGAAGAGGCATCAAAGGTTT
GTGGAGTTTTATGATGTAAGAGATGCAGCAAGGGCTTTAACGGAGATGAATGGAAAAGAG
ATAGATGGGAAGCAATTGTTGATTGAATTCAGTAGGCCAGGTGGAAATAGCAGAAGATTT
TCAAGACCTAATTATTCATCACCTAAATTCAGTCGTAATTCAATCAACAACAATTATTCT
CCTCCACAAAAATCTCAAAGGGTGTACACTTCACATTCCCAGAAATCAAATTATGGAAAC
CCTAGTGGAAGTGAGAGTTCAGGTAGTGGGTCTGTTCAAGATTCATTGGCATCTTTGTGT
ATATCAAATAATGGTAGGCCTGGGAAAATCAAGAATGCCAAAACATGTACTAAAACTATT
AGTCCAAGCAGTAGCAGTGTTACAACTTCTTCGTCGAAGCAGATTTTACTACAAGTTAAG
AGCAATAAACCATGGAAACAGGCCAGAGATTATGATCCTCGTTTCCTAATTAACGAAGAT
GCCATTATGGAATCAAATTGCAGTGATACCAGAACTACTGTCATGATTAAAAACATACCC
AACAAGTACAGTCAGAAGCTGCTGCTGAACATGCTGGACAACCACTGCATTCACTATAAC
GAGCAGATTGCCGACGGCGATGATCAGCAGCAGCCAAAATCCTCCTACGATTTCGTTTAT
CTTCCCATTGATTTCATTAACAAGTGCAACGTGGGATATGGATTCGTGAACATGACTTCA
CCACAGGCAACTTTGAGACTCTACAAAGCTTTTCACCATCAAAGTTGGGAGGTCTTCAAC
TCTAGAAAAATCTGCCAAGTTACTTATGCTAGATTACAAGGAATAGAAGCACTAAAAGAA
CATTTCAAGAACTCAAAGTTCCCATGTGAAGCAGAGGAATACATGCCAGTAATATTCTCA
CCACCTCGAGATGGCAAGTTATTAACAGAAGCTGTTCCTATAGTGGGTCGAGGAATGAAC
CCTCCTCCATTACTCCTTTCTGCCGTCACTTCCTATAAGGAACAAGAAGAAGAAGAGGAG
TCTGATTCGGTAGAACAACTACTAGTGGAAGAAGTTGGTAGGCTAGTAGATGATAATGAA
AATGGCTATATGGACAGAACTAATGATGACAAAGAAGCAAGAAACGGCGGCGTTGGTGTT
GGTGTTGGTGTTGGTGAAGAAGATTACGATGACGACAACAACAATGATTCAAGATCATTT
GCTGCTTCCATCTGCATGTAA

Peptide Sequence

PEP ID

XP_016497869.1
PEP Infomation

PREDICTED: protein terminal ear1 homolog [Nicotiana tabacum]
Sequence

MEDNGMVHGNLDPRAQEFIPRYPFHQPPNNSLPLLPNQFYYPAYPCPPQLPPPLPPSLPP
YGDDVGYHQVTHTAYVSSNPPMPTPFLPPPSSMATRTLLLSMVPVEVSESIVRRDLEVFG
DVRAVQMGRLREGIVTVHFYDLRHARAALIEIQEQNMQQQCRLRRHYEESIYSTTMGGLI
LPPLPFPLPPPARGLIAGRAVWAQFTFPLTSSLPDGNNQGTLVIFNLDSHTSSTYLRDIF
QAFGNVKELRETPMKRHQRFVEFYDVRDAARALTEMNGKEIDGKQLLIEFSRPGGNSRRF
SRPNYSSPKFSRNSINNNYSPPQKSQRVYTSHSQKSNYGNPSGSESSGSGSVQDSLASLC
ISNNGRPGKIKNAKTCTKTISPSSSSVTTSSSKQILLQVKSNKPWKQARDYDPRFLINED
AIMESNCSDTRTTVMIKNIPNKYSQKLLLNMLDNHCIHYNEQIADGDDQQQPKSSYDFVY
LPIDFINKCNVGYGFVNMTSPQATLRLYKAFHHQSWEVFNSRKICQVTYARLQGIEALKE
HFKNSKFPCEAEEYMPVIFSPPRDGKLLTEAVPIVGRGMNPPPLLLSAVTSYKEQEEEEE
SDSVEQLLVEEVGRLVDDNENGYMDRTNDDKEARNGGVGVGVGVGEEDYDDDNNNDSRSF
AASICM

Transcript Sequence

Gene sequence data has not been registered.